Collection of workflows designed to assembled a set of PacBio HiFi and Illumina HiC reads into a chromosome-scale de-novo assembly.
Development versions of these pipelines can be found in the ERGA github and any questions or queries can be raised on the ERGA Discussions Channel
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Items
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HiC scaffolding pipeline
- Added about 2 months ago -
Purge retained haplotypes using Purge-Dups
- Added about 2 months ago -
HiC contact map generation
- Added about 2 months ago
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Created: 16th Mar 2024 at 09:08
Last updated: 16th Mar 2024 at 09:10
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