/*
========================================================================================
    Nextflow config file for running full-size tests
========================================================================================
    Defines input files and everything required to run a full size pipeline test.

    Use as follows:
        nextflow run nf-core/bcellmagic -profile test_full,<docker/singularity>

----------------------------------------------------------------------------------------
*/

params {
    config_profile_name        = 'Full test profile'
    config_profile_description = 'Full test dataset to check pipeline function'

    // Input data
    input = 's3://nf-core-awsmegatests/bcellmagic/input_data/pcr_umi/metadata_pcr_umi.tsv'
    cprimers = 's3://nf-core-awsmegatests/bcellmagic/input_data/pcr_umi/cprimers.fasta'
    vprimers = 's3://nf-core-awsmegatests/bcellmagic/input_data/pcr_umi/vprimers.fasta'

    // Other params
    protocol = 'pcr_umi'
    cprimer_position = 'R1'
    index_file = false
    umi_length = 15
    umi_start = 0
    umi_position = 'R1'
    loci = 'ig'
}
