Characterization of Prokaryotic and Eukaryotic Biodiversity from Soil Samples

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Within Biodiversity Genomics Europe (BGE), under the Metabarcoding for Biomonitoring Task 6.2, we have developed a standard operating procedure (SOP) for the DNA extraction and Illumina amplicon library preparation of soil core samples for the characterization of Prokaryotic and Eukaryotic biodiversity from soil samples. This SOP covers the laboratory workflows that follow terrestrial field sampling for the case study "Ecological Restoration - Soil Chronosequences" (https://doi.org/10.48546/workflowhub.sop.19.1).

SEEK ID: https://workflowhub.eu/sops/12?version=2

Filename: Matabarcoding_ERS_eDNAProtocol_V1.pdf  Download

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Size: 337 KB

DOI: 10.48546/workflowhub.sop.12.2

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Chaves, C., Najera Cortazar, L., Martins, F., Anslan, S., Beja-Pereira, A., Magalhães, M., & Price, B. (2025). Characterization of Prokaryotic and Eukaryotic Biodiversity from Soil Samples. WorkflowHub. https://doi.org/10.48546/WORKFLOWHUB.SOP.12.2
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Created: 27th Mar 2024 at 13:37

Last updated: 28th Jan 2026 at 18:24

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Version 2 (latest) Created 18th Apr 2025 at 15:35 by Cátia Chaves

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Version 1 (earliest) Created 27th Mar 2024 at 13:37 by Cátia Chaves

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