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A collection of image processing templates designed to support data collection and automated processing for Single Particle Analysis (SPA) in cryo-electron microscopy. The workflows range from simple pipelines—including movie alignment, CTF estimation, and quality assessment—to fully automated 2D and 3D processing. Please select the workflow that best suits your needs.

Maintainers: Daniel Marchan

Number of items: 12

Tags: scipion, cryoem, spa

A set of generic and automatic workflows designed to: 

  • Run on-the-fly and unattended.

  • Maintain robust stability for a wide range of samples.

  • Covers steps from movies to CTF estimation (for the moment).

  • Monitor the acquisition process and provide user feedback.

  • Comprise three proposed workflows, each with an additional layer of complexity.

Maintainers: Daniel Marchan

Number of items: 4

Tags: scipion, cryoem, spa, image processing

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